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interactive-embedding-kidney

This repo contains the file to generate an interactive view of a feature set in the tensorflow embedding projector web-interface.
Click here to open the interactive figure directly ! A similar visualization can be done with KNIME. Get the workflow.

The features are derived from a toxicity screening in Zebrafish.
See the associated paper

Westhoff, J. H., Steenbergen, P. J., Thomas, L. S. V., Heigwer, J., Bruckner, T., Cooper, L., Tönshoff, B., Hoffmann, G. F. and Gehrig, J. (2020).
In vivo High-Content Screening in Zebrafish for Developmental Nephrotoxicity of Approved Drugs Front Cell Dev Biol 8, 583,
https://doi.org/10.3389/fcell.2020.00583