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rChartsLocalLib.html
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<!DOCTYPE html>
<!-- saved from url=(0014)about:internet -->
<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8"/>
<title>Markdown example with knitr and rCharts</title>
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background-color: #F8F8F8;
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table, td, th {
border: none;
}
blockquote {
color:#666666;
margin:0;
padding-left: 1em;
border-left: 0.5em #EEE solid;
}
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height: 0px;
border-bottom: none;
border-top-width: thin;
border-top-style: dotted;
border-top-color: #999999;
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max-width:100%;
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a, a:visited {
text-decoration: underline;
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hr {
visibility: hidden;
page-break-before: always;
}
pre, blockquote {
padding-right: 1em;
page-break-inside: avoid;
}
tr, img {
page-break-inside: avoid;
}
img {
max-width: 100% !important;
}
@page :left {
margin: 15mm 20mm 15mm 10mm;
}
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margin: 15mm 10mm 15mm 20mm;
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h2, h3 {
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color: rgb(104, 118, 135)
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}
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color: rgb(0, 0, 205);
}
pre .comment {
color: rgb(76, 136, 107);
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pre .keyword {
color: rgb(0, 0, 255);
}
pre .identifier {
color: rgb(0, 0, 0);
}
pre .string {
color: rgb(3, 106, 7);
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</style>
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<body>
<h1>Markdown example with knitr and rCharts</h1>
<h1></h1>
<p>This is an example file showing how to use rCharts with knitr/markdown. <strong>rCharts</strong> an R package to create, customize and publish interactive javascript visualizations from R.</p>
<p>Let's first install it, it lives on github, not on CRAN yet.</p>
<pre><code class="r">require(devtools)
install_github("rCharts", "ramnathv", ref = "dev")
</code></pre>
<h2>Scatter plot using Polycharts</h2>
<pre><code class="r">require(rCharts)
</code></pre>
<pre><code>## Loading required package: rCharts
</code></pre>
<pre><code class="r">
names(iris) = gsub("\\.", "", names(iris))
add_lib_assets("Polycharts", cdn = TRUE)
</code></pre>
<p>[1] “<script type='text/javascript' src=https://rawgithub.com/Polychart/polychart2/develop/polychart2.standalone.js></script>”</p>
<pre><code class="r">r1 <- rPlot(SepalLength ~ SepalWidth | Species, data = iris, color = "Species",
type = "point")
r1$print("polyScatter")
</code></pre>
<div id = 'polyScatter' class = 'rChart polycharts'></div>
<script type='text/javascript'>
var chartParams = {
"dom": "polyScatter",
"width": 800,
"height": 400,
"layers": [
{
"x": "SepalWidth",
"y": "SepalLength",
"data": {
"SepalLength": [ 5.1, 4.9, 4.7, 4.6, 5, 5.4, 4.6, 5, 4.4, 4.9, 5.4, 4.8, 4.8, 4.3, 5.8, 5.7, 5.4, 5.1, 5.7, 5.1, 5.4, 5.1, 4.6, 5.1, 4.8, 5, 5, 5.2, 5.2, 4.7, 4.8, 5.4, 5.2, 5.5, 4.9, 5, 5.5, 4.9, 4.4, 5.1, 5, 4.5, 4.4, 5, 5.1, 4.8, 5.1, 4.6, 5.3, 5, 7, 6.4, 6.9, 5.5, 6.5, 5.7, 6.3, 4.9, 6.6, 5.2, 5, 5.9, 6, 6.1, 5.6, 6.7, 5.6, 5.8, 6.2, 5.6, 5.9, 6.1, 6.3, 6.1, 6.4, 6.6, 6.8, 6.7, 6, 5.7, 5.5, 5.5, 5.8, 6, 5.4, 6, 6.7, 6.3, 5.6, 5.5, 5.5, 6.1, 5.8, 5, 5.6, 5.7, 5.7, 6.2, 5.1, 5.7, 6.3, 5.8, 7.1, 6.3, 6.5, 7.6, 4.9, 7.3, 6.7, 7.2, 6.5, 6.4, 6.8, 5.7, 5.8, 6.4, 6.5, 7.7, 7.7, 6, 6.9, 5.6, 7.7, 6.3, 6.7, 7.2, 6.2, 6.1, 6.4, 7.2, 7.4, 7.9, 6.4, 6.3, 6.1, 7.7, 6.3, 6.4, 6, 6.9, 6.7, 6.9, 5.8, 6.8, 6.7, 6.7, 6.3, 6.5, 6.2, 5.9 ],
"SepalWidth": [ 3.5, 3, 3.2, 3.1, 3.6, 3.9, 3.4, 3.4, 2.9, 3.1, 3.7, 3.4, 3, 3, 4, 4.4, 3.9, 3.5, 3.8, 3.8, 3.4, 3.7, 3.6, 3.3, 3.4, 3, 3.4, 3.5, 3.4, 3.2, 3.1, 3.4, 4.1, 4.2, 3.1, 3.2, 3.5, 3.6, 3, 3.4, 3.5, 2.3, 3.2, 3.5, 3.8, 3, 3.8, 3.2, 3.7, 3.3, 3.2, 3.2, 3.1, 2.3, 2.8, 2.8, 3.3, 2.4, 2.9, 2.7, 2, 3, 2.2, 2.9, 2.9, 3.1, 3, 2.7, 2.2, 2.5, 3.2, 2.8, 2.5, 2.8, 2.9, 3, 2.8, 3, 2.9, 2.6, 2.4, 2.4, 2.7, 2.7, 3, 3.4, 3.1, 2.3, 3, 2.5, 2.6, 3, 2.6, 2.3, 2.7, 3, 2.9, 2.9, 2.5, 2.8, 3.3, 2.7, 3, 2.9, 3, 3, 2.5, 2.9, 2.5, 3.6, 3.2, 2.7, 3, 2.5, 2.8, 3.2, 3, 3.8, 2.6, 2.2, 3.2, 2.8, 2.8, 2.7, 3.3, 3.2, 2.8, 3, 2.8, 3, 2.8, 3.8, 2.8, 2.8, 2.6, 3, 3.4, 3.1, 3, 3.1, 3.1, 3.1, 2.7, 3.2, 3.3, 3, 2.5, 3, 3.4, 3 ],
"PetalLength": [ 1.4, 1.4, 1.3, 1.5, 1.4, 1.7, 1.4, 1.5, 1.4, 1.5, 1.5, 1.6, 1.4, 1.1, 1.2, 1.5, 1.3, 1.4, 1.7, 1.5, 1.7, 1.5, 1, 1.7, 1.9, 1.6, 1.6, 1.5, 1.4, 1.6, 1.6, 1.5, 1.5, 1.4, 1.5, 1.2, 1.3, 1.4, 1.3, 1.5, 1.3, 1.3, 1.3, 1.6, 1.9, 1.4, 1.6, 1.4, 1.5, 1.4, 4.7, 4.5, 4.9, 4, 4.6, 4.5, 4.7, 3.3, 4.6, 3.9, 3.5, 4.2, 4, 4.7, 3.6, 4.4, 4.5, 4.1, 4.5, 3.9, 4.8, 4, 4.9, 4.7, 4.3, 4.4, 4.8, 5, 4.5, 3.5, 3.8, 3.7, 3.9, 5.1, 4.5, 4.5, 4.7, 4.4, 4.1, 4, 4.4, 4.6, 4, 3.3, 4.2, 4.2, 4.2, 4.3, 3, 4.1, 6, 5.1, 5.9, 5.6, 5.8, 6.6, 4.5, 6.3, 5.8, 6.1, 5.1, 5.3, 5.5, 5, 5.1, 5.3, 5.5, 6.7, 6.9, 5, 5.7, 4.9, 6.7, 4.9, 5.7, 6, 4.8, 4.9, 5.6, 5.8, 6.1, 6.4, 5.6, 5.1, 5.6, 6.1, 5.6, 5.5, 4.8, 5.4, 5.6, 5.1, 5.1, 5.9, 5.7, 5.2, 5, 5.2, 5.4, 5.1 ],
"PetalWidth": [ 0.2, 0.2, 0.2, 0.2, 0.2, 0.4, 0.3, 0.2, 0.2, 0.1, 0.2, 0.2, 0.1, 0.1, 0.2, 0.4, 0.4, 0.3, 0.3, 0.3, 0.2, 0.4, 0.2, 0.5, 0.2, 0.2, 0.4, 0.2, 0.2, 0.2, 0.2, 0.4, 0.1, 0.2, 0.2, 0.2, 0.2, 0.1, 0.2, 0.2, 0.3, 0.3, 0.2, 0.6, 0.4, 0.3, 0.2, 0.2, 0.2, 0.2, 1.4, 1.5, 1.5, 1.3, 1.5, 1.3, 1.6, 1, 1.3, 1.4, 1, 1.5, 1, 1.4, 1.3, 1.4, 1.5, 1, 1.5, 1.1, 1.8, 1.3, 1.5, 1.2, 1.3, 1.4, 1.4, 1.7, 1.5, 1, 1.1, 1, 1.2, 1.6, 1.5, 1.6, 1.5, 1.3, 1.3, 1.3, 1.2, 1.4, 1.2, 1, 1.3, 1.2, 1.3, 1.3, 1.1, 1.3, 2.5, 1.9, 2.1, 1.8, 2.2, 2.1, 1.7, 1.8, 1.8, 2.5, 2, 1.9, 2.1, 2, 2.4, 2.3, 1.8, 2.2, 2.3, 1.5, 2.3, 2, 2, 1.8, 2.1, 1.8, 1.8, 1.8, 2.1, 1.6, 1.9, 2, 2.2, 1.5, 1.4, 2.3, 2.4, 1.8, 1.8, 2.1, 2.4, 2.3, 1.9, 2.3, 2.5, 2.3, 1.9, 2, 2.3, 1.8 ],
"Species": [ "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "setosa", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "versicolor", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica", "virginica" ]
},
"facet": "Species",
"color": "Species",
"type": "point"
}
],
"facet": {
"type": "wrap",
"var": "Species"
},
"guides": [],
"coord": [],
"id": "polyScatter"
}
_.each(chartParams.layers, function(el){
el.data = polyjs.data(el.data)
})
var graph_polyScatter = polyjs.chart(chartParams);
</script>
<h2>Multi barchart using NVD3</h2>
<pre><code class="r">add_lib_assets("NVD3") # get assets from online repositories
</code></pre>
<p>[1] “<link rel='stylesheet' href=/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rCharts/libraries/NVD3/css/nv.d3.css>\n<link rel='stylesheet' href=/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rCharts/libraries/NVD3/css/rNVD3.css>\n<script type='text/javascript' src=/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rCharts/libraries/NVD3/js/jquery-1.8.2.min.js></script>\n<script type='text/javascript' src=/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rCharts/libraries/NVD3/js/d3.v3.min.js></script>\n<script type='text/javascript' src=/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rCharts/libraries/NVD3/js/nv.d3.min-new.js></script>\n<script type='text/javascript' src=/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rCharts/libraries/NVD3/js/fisheye.js></script>”</p>
<pre><code class="r">hair_eye_male <- subset(as.data.frame(HairEyeColor), Sex == "Male")
n1 <- nPlot(Freq ~ Hair, group = "Eye", data = hair_eye_male, type = "multiBarChart")
n1$chart(height = 200) # change plot height Chrome/FF doesn't automatically get plot height but safari does
n1$print("nvd3mbar")
</code></pre>
<div id = 'nvd3mbar' class = 'rChart nvd3'></div>
<script type='text/javascript'>
$(document).ready(function(){
drawnvd3mbar()
});
function drawnvd3mbar(){
var opts = {
"dom": "nvd3mbar",
"width": 800,
"height": 400,
"x": "Hair",
"y": "Freq",
"group": "Eye",
"type": "multiBarChart",
"id": "nvd3mbar"
},
data = [
{
"Hair": "Black",
"Eye": "Brown",
"Sex": "Male",
"Freq": 32
},
{
"Hair": "Brown",
"Eye": "Brown",
"Sex": "Male",
"Freq": 53
},
{
"Hair": "Red",
"Eye": "Brown",
"Sex": "Male",
"Freq": 10
},
{
"Hair": "Blond",
"Eye": "Brown",
"Sex": "Male",
"Freq": 3
},
{
"Hair": "Black",
"Eye": "Blue",
"Sex": "Male",
"Freq": 11
},
{
"Hair": "Brown",
"Eye": "Blue",
"Sex": "Male",
"Freq": 50
},
{
"Hair": "Red",
"Eye": "Blue",
"Sex": "Male",
"Freq": 10
},
{
"Hair": "Blond",
"Eye": "Blue",
"Sex": "Male",
"Freq": 30
},
{
"Hair": "Black",
"Eye": "Hazel",
"Sex": "Male",
"Freq": 10
},
{
"Hair": "Brown",
"Eye": "Hazel",
"Sex": "Male",
"Freq": 25
},
{
"Hair": "Red",
"Eye": "Hazel",
"Sex": "Male",
"Freq": 7
},
{
"Hair": "Blond",
"Eye": "Hazel",
"Sex": "Male",
"Freq": 5
},
{
"Hair": "Black",
"Eye": "Green",
"Sex": "Male",
"Freq": 3
},
{
"Hair": "Brown",
"Eye": "Green",
"Sex": "Male",
"Freq": 15
},
{
"Hair": "Red",
"Eye": "Green",
"Sex": "Male",
"Freq": 7
},
{
"Hair": "Blond",
"Eye": "Green",
"Sex": "Male",
"Freq": 8
}
]
var data = d3.nest()
.key(function(d){
return opts.group === undefined ? 'main' : d[opts.group]
})
.entries(data)
nv.addGraph(function() {
var chart = nv.models[opts.type]()
.x(function(d) { return d[opts.x] })
.y(function(d) { return d[opts.y] })
.width(opts.width)
.height(opts.height)
chart
.height( 200)
d3.select("#" + opts.id)
.append('svg')
.datum(data)
.transition().duration(500)
.call(chart);
nv.utils.windowResize(chart.update);
return chart;
});
};
</script>
<h2>Scatter Plot from NVD3</h2>
<p>Scatter plot example with rCharts using NVD3 JS library</p>
<pre><code class="r">data(iris)
sepal <- iris[, c(1:2, 5)]
n2 <- nPlot(Sepal.Length ~ Sepal.Width, data = sepal, type = "scatterChart",
group = "Species")
n2$xAxis(axisLabel = "Sepal.Width") # add x axis label
n2$yAxis(axisLabel = "Sepal.Length")
n2$chart(height = 400) # change plot height Chrome/FF doesn't automatically get plot height but safari does
n2$print("nvd3Scatter")
</code></pre>
<div id = 'nvd3Scatter' class = 'rChart nvd3'></div>
<script type='text/javascript'>
$(document).ready(function(){
drawnvd3Scatter()
});
function drawnvd3Scatter(){
var opts = {
"dom": "nvd3Scatter",
"width": 800,
"height": 400,
"x": "Sepal.Width",
"y": "Sepal.Length",
"type": "scatterChart",
"group": "Species",
"id": "nvd3Scatter"
},
data = [
{
"Sepal.Length": 5.1,
"Sepal.Width": 3.5,
"Species": "setosa"
},
{
"Sepal.Length": 4.9,
"Sepal.Width": 3,
"Species": "setosa"
},
{
"Sepal.Length": 4.7,
"Sepal.Width": 3.2,
"Species": "setosa"
},
{
"Sepal.Length": 4.6,
"Sepal.Width": 3.1,
"Species": "setosa"
},
{
"Sepal.Length": 5,
"Sepal.Width": 3.6,
"Species": "setosa"
},
{
"Sepal.Length": 5.4,
"Sepal.Width": 3.9,
"Species": "setosa"
},
{
"Sepal.Length": 4.6,
"Sepal.Width": 3.4,
"Species": "setosa"
},
{
"Sepal.Length": 5,
"Sepal.Width": 3.4,
"Species": "setosa"
},
{
"Sepal.Length": 4.4,
"Sepal.Width": 2.9,
"Species": "setosa"
},
{
"Sepal.Length": 4.9,
"Sepal.Width": 3.1,
"Species": "setosa"
},
{
"Sepal.Length": 5.4,
"Sepal.Width": 3.7,
"Species": "setosa"
},
{
"Sepal.Length": 4.8,
"Sepal.Width": 3.4,
"Species": "setosa"
},
{
"Sepal.Length": 4.8,
"Sepal.Width": 3,
"Species": "setosa"
},
{
"Sepal.Length": 4.3,
"Sepal.Width": 3,
"Species": "setosa"
},
{
"Sepal.Length": 5.8,
"Sepal.Width": 4,
"Species": "setosa"
},
{
"Sepal.Length": 5.7,
"Sepal.Width": 4.4,
"Species": "setosa"
},
{
"Sepal.Length": 5.4,
"Sepal.Width": 3.9,
"Species": "setosa"
},
{
"Sepal.Length": 5.1,
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