cryosparc-pcluster.config.template

[aws]
aws_region_name = @AWS_REGION@

[global]
cluster_template = cryosparc
update_check = true
sanity_check = true

[aliases]
ssh = ssh {CFN_USER}@{MASTER_IP} {ARGS}

[cluster cryosparc]
base_os = alinux2
dashboard_settings = cryosparc-dashboard
ebs_settings = cryosparc-ebs
enable_intel_hpc_platform = false
ephemeral_dir = /scratch
fsx_settings = cryosparc-fsx
key_name = @AWS_KEY@
master_instance_type = c5n.9xlarge
master_root_volume_size = 100
post_install = https://structura-assets.s3.amazonaws.com/aws-deployment-guide/install-cryosparc_v1.sh
post_install_args = '@CRYOSPARC_LICENSE_ID@'
queue_settings = gpu-large, gpu-med, gpu-small
s3_read_resource = arn:aws:s3:::@S3_DATA_BUCKET@/*
scheduler = slurm
vpc_settings = cryosparc-vpc

[vpc cryosparc-vpc]
vpc_id = @VPC_ID@
master_subnet_id = @MASTER_SUBNET_ID@
compute_subnet_id = @COMPUTE_SUBNET_ID@
use_public_ips = false

[dashboard cryosparc-dashboard]
enable = true

[queue gpu-large]
compute_resource_settings = p4d-24xlarge, p3-16xlarge, g4dn-metal
compute_type = ondemand
disable_hyperthreading = true
enable_efa = false
placement_group = DYNAMIC

[queue gpu-med]
compute_resource_settings = p3-8xlarge, g4dn-12xlarge
compute_type = ondemand
disable_hyperthreading = true
enable_efa = false
placement_group = DYNAMIC

[queue gpu-small]
compute_resource_settings = p3-2xlarge, g4dn-16xlarge
compute_type = ondemand
disable_hyperthreading = true
enable_efa = false
placement_group = DYNAMIC

[compute_resource g4dn-16xlarge]
initial_count = 0
instance_type = g4dn.16xlarge
max_count = 20
min_count = 0

[compute_resource g4dn-12xlarge]
initial_count = 0
instance_type = g4dn.12xlarge
max_count = 20
min_count = 0

[compute_resource g4dn-metal]
initial_count = 0
instance_type = g4dn.metal
max_count = 20
min_count = 0

[compute_resource p3-2xlarge]
initial_count = 0
instance_type = p3.2xlarge
max_count = 20
min_count = 0

[compute_resource p3-8xlarge]
initial_count = 0
instance_type = p3.8xlarge
max_count = 20
min_count = 0

[compute_resource p3-16xlarge]
initial_count = 0
instance_type = p3.16xlarge
max_count = 20
min_count = 0

[compute_resource p4d-24xlarge]
initial_count = 0
instance_type = p4d.24xlarge
max_count = 20
min_count = 0

[ebs cryosparc-ebs]
encrypted = false
shared_dir = /shared
volume_size = 100
volume_type = gp3

[fsx cryosparc-fsx]
deployment_type = SCRATCH_2
export_path = s3://@S3_DATA_BUCKET@
import_path = s3://@S3_DATA_BUCKET@
imported_file_chunk_size = 1024
shared_dir = /fsx
storage_capacity = 2400